Identification and screening of sleep mutant fruit flies using home lab setups and behavioral studies

The credit of write up @Sailekshmi
I have copy and pasted the write up sent in CUBE What’s app group with the objective to archive the data and documentation and I also encourage @Sailekshmi to post the summery on metastudio.

CUBE ChatShaala Meeting Summary

Date : 11th June 2025
Key Discussion : Identification and screening of sleep mutant fruit flies using home lab setups and behavioral studies.
Main Presenter : Ayana (Nallalam, Kozhikode)
Collaborators Noted : Akanksha, others involved in whiteboard synthesis


:dna: Concepts Explored

:fly: Wild-Type vs Sleep Mutant Fruit Flies

Wild-Type Flies : Active during daytime, sleep at night.

Sleep Mutants : Show opposite activity — awake and active at night, rest during the day.

Key indicators : Mating, climbing, feeding observed at night for sleep mutants.

:petri_dish: Experimental Tools

BRSV & TRSV Bottles : Used to maintain different cultures.

Banana peel in 500 ml bottles as attractant for wild types.

Tomato slices as bait in mutant screening ( Ayana’s setup ).


:test_tube: Ayana’s Home Lab Experiment

Objective : To trap and culture native sleep mutant fruit flies.

Setup Date : 7th June 2025, 10 PM
Bait : Tomato slice
Observations at Different Times:

Night : Almost no flies trapped till 3 AM.

Morning ( 8 AM–2 PM ): Sharp increase; 43 flies trapped by 1:30 PM.

At 3 AM, two gravid ( egg-carrying ) flies were successfully trapped.


:dna: Single Line Culture Results

Bottle A : 3 AM flies transferred → After 2 days → 30 larvae observed.

Bottle B : Mother fly transferred separately → No larvae observed → Suggests fly still active (not laid eggs yet).

This strongly supports the hypothesis that the flies trapped at 3 AM were gravid and were active only at night — indicating possible sleep mutant behavior.


:arrows_counterclockwise: Life Cycle Recap (Observed in A Bottle)

  1. Gravid fly → Egg (0.3 mm)

  2. 1st Instar Larva (1 mm)

  3. 2nd Instar (2 mm)

  4. 3rd Instar (5 mm)

  5. Pre-Pupa → Pupa → Adult

Note : Larval stages are motile, while pupal stages are non-motile.


:test_tube: Akanksha’s Screening Proposal

  • Set up screening of mutant flies at 3 AM (feeding, climbing, mating expected).

  • Re-check activity at 9 AM.

  • Concept of “Sleep Mutant” being probed by monitoring activity patterns across time points.


:brain: Queries for Reflection and Further ChatShaala Discussions

  1. How can we distinguish sleep mutants from early risers or late sleepers among wild types?

  2. Is a single time-point (e.g., 3 AM) enough to confirm sleep mutation? Or do we need a full circadian activity chart?

  3. Why did Bottle B show no larvae even after 3 days—what could have happened to the egg-laying process?

  4. Can temperature of Nallalam (Ayana’s place) influence sleep-wake cycles in native fruit flies?

  5. Would replicating the experiment with different baits (banana vs. tomato) influence results?

  6. How can Ayana’s experimental strategy be improved for scaling screening of more suspected mutants?


    :petri_dish: ChatShaala Summary – 11 June 2025 (For School Cubists)

  7. What Are “Sleep Mutant” Fruit Flies?

Normal fruit flies are awake during the day and sleep at night.

Sleep mutants do the opposite : they’re awake at night and sleep during the day.


  1. Ayana’s Home-Lab Setup

She used two plastic bottles (500 ml) with tomato slices as bait.

Bottle A & Bottle B were set at 10 PM on 7 June.

Aim : to catch flies that are awake at night and maybe laying eggs.


  1. What Did Ayana Observe?

Nighttime ( 11 PM–3 AM ): Almost no flies seen.

Early morning ( 8 AM–1 PM ): Many flies appeared—up to 43!

At 3 AM, two flies carrying eggs (called “ gravid ” flies) were caught—this is a big clue!


  1. What Happened Next in Bottle A & B?

Bottle A : After 2 days, found 30 baby fly larvae—meaning the flies laid eggs!

Bottle B : After 3 days, still no larvae—so the flies didn’t lay eggs there.

:point_right: This suggests the flies caught at 3 AM were indeed sleep mutants, active at night.


  1. Life Cycle of a Fruit Fly (Observed)

  2. Egg (tiny, about 0.3 mm)

  3. 1st-Stage Larva (1 mm)

  4. 2nd-Stage Larva (2 mm)

  5. 3rd-Stage Larva (5 mm)

  6. → Pre-pupa, then Pupa, then Adult fly


  1. Akanksha’s Screening Plan

Check at 3 AM for feeding or egg-laying—that’s when sleep mutants should be active.

Check again at 9 AM, when normal flies are usually awake.

This helps us compare and confirm which flies are mutant.


:thinking: Questions to Think About

  1. How can we be sure a fly is a sleep mutant and not just sleeping late?

  2. Should we check at more times (like midnight, 6 AM) to be confident?

  3. Why did Bottle B have no larvae—what might have happened?

  4. Could the temperature or home location (like Kozhikode) affect sleep patterns?

  5. What if we use a different bait (like banana) instead of tomato—would it change who comes?


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